A lot is said about the differences in the data between MySQL and MongoDB. Things such as “MongoDB is document based”, “MySQL is relational”, “InnoDB has a clustering key”, etc.. Some may wonder how TokuDB, our MySQL storage engine, and TokuMX, our MongoDB product, fit in with these data layouts. I could not find anything describing the differences with a simple google search, so I figured I’d write a post explaining how things compare.

So who are the players here? With MySQL, users are likely familiar with two storage engines: MyISAM, the original default up until …

Introduction

InnoDB is a general-purpose storage engine that balances high reliability and high performance. It is a transactional storage engine and is fully ACID compliant, as would be expected from any relational database. The durability guarantee provided by InnoDB is made possible by the redo logs.

This article will provide an overview of the redo log subsystem or log subsystem of InnoDB. We will look at the following details:

• The global log system object, which provides access to important data structures and information.
• The mini-transaction (mtr), using which all redo log records are created.
• The global in-memory log buffer (or just log buffer), into which the redo logs are written to from the mini transaction buffer. This log buffer will be periodically flushed to the log file on disk. …

I’m always switching back-and-forth between the 2 different InnoDB flavors in MariaDB – XtraDB+ and the standard InnoDB plugin, so I thought I’d simply post all of the various combinations in a single place. (And then I cover enabling the InnoDB Plugin in MySQL, since it’s an option in 5.1.) [Addition: Thanks to Andrew and Sergei for the tips on shortening plugin-load=. The changes are reflected below.]

Note: Below is for Windows. For Linux, simply change “.dll” to “.so” where appropriate.

MariaDB 10.0:

Do not add anything, as the standard InnoDB plugin is the current default (as of 10.0.3, although I do anticipate this changing in the near future, and I’ll update the post accordingly when that happens).

MariaDB 5.5:

# Enable the 2 below to disable XtraDB+ and enable the standard InnoDB Plugin
ignore_builtin_innodb
plugin-load=ha_innodb.dll

…

Introduction

Transaction locks are an important feature of any transactional storage engine. There are two types of transaction locks – table locks and row locks. Table locks are used to avoid a table being altered or dropped by one transaction when another transaction is using the table. It is also used to prohibit a transaction from accessing a table, when it is being altered. InnoDB supports multiple granularity locking (MGL). So to access rows in a table, intention locks must be taken on the tables.

Row locks are at finer granularity than table level locks, different threads can work on different parts of the table without interfering with each other. This is in contrast with MyISAM where the entire table has to be locked when updating even unrelated rows. Having row locks means that multiple transactions can read and write into a single …

Shard-Query inserts data into a “coordinator” table when answering queries.   When there is a GROUP BY on the original query, the coordinator table contains a UNIQUE KEY over the GROUP BY attributes.   Shard-Query uses INSERT .. ON DUPLICATE KEY UPDATE in combination with bulk insert (insert into … values (),(),() ) when inserting into the table.

For what would normally be efficiency sake, Shard-Query sends queries to the shards using ORDER BY NULL which disables the filesort operation. Of course, this often results in the rows being sent back from the shards in random order.

Because the results are in random order, the bulk insertion that the worker does into the coordinator table can deadlock with other worker threads when using InnoDB or TokuDB as the coordinator table. Right now I’ve just been using MyISAM for the coordinator table, which serializes queries at the bulk insert stage.  Having to insert the …

MySQL can optimize aggregate functions like MIN and MAX as long as the columns specified are indexed. This means that, in the case of MIN and MAX, the optimizer should be able to identify the highest and lowest values of an indexed column from the B-Tree index. Say I have a table like below:

CREATE TABLE `history` (
   `h_id` bigint(20) unsigned NOT NULL AUTO_INCREMENT,
   `u_id` int(10) unsigned NOT NULL,
   `cn_id` int(10) unsigned NOT NULL,
   `f_id` int(10) unsigned NOT NULL
   PRIMARY KEY (`h_id`)
 ) ENGINE=InnoDB

If I want to get the MAX value for cn_id, I’d to a query like this which will be a full table scan:

mysql (test) > EXPLAIN SELECT MAX(cn_id) FROM history \G
 *************************** 1. row ***************************
            id: 1
   select_type: SIMPLE
         table: history
          type: ALL
 possible_keys: NULL
           key: NULL
       key_len: NULL
           ref: NULL
          rows: 19908716 …

Scaling up a workload to many cores on a single host

Here are results for Shard-Query 2.0 Beta 1* on the Star Schema Benchmark at scale factor 10.  In the comparison below the “single threaded” response times for InnoDB are the response times reported in my previous test which did not use Shard-Query.

Shard-Query configuration

Shard-Query has been configured to use a single host.  The Shard-Query configuration repository is stored on the host.  Gearman is also running on the host, as are the Gearman workers.  In short, only one host is involved in the testing.

The …

Following are benchmark results comparing Tokutek TokuDB and Percona XtraDB at scale factor 10 on the Star Schema benchmark. I’m posting this on the Shard-Query blog because I am going to compare the performance of Shard-Query on the benchmark on these two engines. First, however, I think it is important to see how they perform in isolation without concurrency.

Because I am going to be testing Shard-Query, I have chosen to partition the “fact” table (lineorder) by month. I’ve attached the full DDL at the end of the post as well as the queries again for reference.

I want to note a few things about the results:
First and foremost, TokuDB was configured to use quicklz compression (the default) and InnoDB compression was not used. No tuning of TokuDB was performed, which means it will use up to 50% of memory by default. Various InnoDB tuning options were set (see the end of the post) but the most important is that the …

This blog post is part two in what is now a continuing series on the Star Schema Benchmark.

In my previous blog post I compared MySQL 5.5.30 to MySQL 5.6.10, both with default settings using only the InnoDB storage engine.  In my testing I discovered that innodb_old_blocks_time had an effect on performance of the benchmark.  There was some discussion in the comments and I promised to follow up with more SSB tests at a later date.

I also promised more low concurrency SSB tests when Peter blogged about the importance of performance at low concurrency.

The SSB
The SSB tests a database’s ability to optimize queries for a star schema. A star …

This is part 2, you can find part 1 here.

So in part 1 we learned how to calculate the free space within InnoDB. But unfortunately that won't always work perfectly.

The first issue: the DATA_FREE column in the INFORMATION_SCHEMA.TABLES table will not show a sum of the free space of each partition. This means that if you have innodb_file_per_table disabled and are using partitioning then you must divide DATA_FREE by the number of partitions.
This is Bug #36312.

Example:

mysql> SELECT CONCAT(T.TABLE_SCHEMA,'.',T.TABLE_NAME) AS TABLE_NAME,
    -> P.PARTITION_NAME AS PART,IBT.SPACE,IBD.PATH,T.DATA_FREE AS T_DATA_FREE,
    -> P.DATA_FREE AS P_DATA_FREE FROM INFORMATION_SCHEMA.TABLES T 
    -> LEFT …