This post was originally published in October 2018 and was updated in March 2023.

pt-query-digest is one of the most commonly used tools for query auditing in MySQL. By default, pt-query-digest reports the top ten queries consuming the most amount of time inside MySQL. A query that takes more time than the set threshold for completion is considered slow, but it’s not always true that tuning such queries makes them faster. Sometimes, when resources on the server are busy, it will impact every other operation on the server, and so will impact queries too. In such cases, you will see the proportion of slow queries going up. That can also include queries that work fine in general.

This article explains a small trick to identify such spots using pt-query-digest and the slow query log. pt-query-digest …